ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-1236
source: miRBase, original name: ptr-mir-1236 (MI0008438)
SEQUENCE & STRUCTURE| miRNA CCTCTTCCCCTTGTCTCTCCA miRNA* TGAGTGACAGGGGAAATGGGGAT mismatches: 2 bulges: 4 |
pre-miRNA
GTGAGTGACAGGGGAAATGGGGATGGACTGGAAGTGGGCAGCATGGAGCTGACCTTCATCATGGCTTGGCCAACATAATGCCTCTTCCCCTTGTCTCTCC
A
dot-bracket secondary structure
(.(((.((((((((((..((((........((.(.(((((((.....)))).))).).)).((((...))))........)))))))))).)))).))))
.
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
GTGAGTGACAGGGGAAATGGGGATGGACTGGAAGTGGGCAGCATGGAGCTGACCTTCATCATGGCTTGGCCAACATAATGCCTCTTCCCCTTGTCTCTCC
A
dot-bracket secondary structure
(.(((.((((((((((..((((........((.(.(((((((.....)))).))).).)).((((...))))........)))))))))).)))).))))
.
SIMILARITIES| miRBase hsa-mir-1236: 1e-52 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
