ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-1237
source: miRBase, original name: ptr-mir-1237 (MI0008439)
SEQUENCE & STRUCTURE| miRNA TCCTTCTGCTCCGTCCCCCAG miRNA* GGGAGGGCCCAGGCGCGGGCAGGGGT mismatches: 2 bulges: 5 |
pre-miRNA
TGGGAGGGCCCAGGCGCGGGCAGGGGTGGGGGTGGCAGAGCGCTGTCCCGGGGGCGGGGCCGAAGCGCGGCGACCGTAACTCCTTCTGCTCCGTCCCCCA
G
dot-bracket secondary structure
((((.((((...((.(((((.((((((.(.(((.((...(((((((((((....))))))...))))).)).))).).))))))))))).))))))))))
.
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
TGGGAGGGCCCAGGCGCGGGCAGGGGTGGGGGTGGCAGAGCGCTGTCCCGGGGGCGGGGCCGAAGCGCGGCGACCGTAACTCCTTCTGCTCCGTCCCCCA
G
dot-bracket secondary structure
((((.((((...((.(((((.((((((.(.(((.((...(((((((((((....))))))...))))).)).))).).))))))))))).))))))))))
.
SIMILARITIES| miRBase hsa-mir-1237: 9e-17 PMRD no hits microPC no hits | UniProt no hits RFAM mir-1237: 0.000000000000002 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
