ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-1244
source: miRBase, original name: ptr-mir-1244-6 (MI0008445)
SEQUENCE & STRUCTURE| miRNA AAGTAGTTGGTTTGTATGAGATGGTT miRNA* TTATTCCGAGCATTCCAGTAACTTTTTTGTGT mismatches: 9 bulges: 6 |
pre-miRNA
ATCTTATTCCGAGCATTCCAGTAACTTTTTTGTGTATGTACTTAGCTGTACTATAAGTAGTTGGTTTGTATGAGATGGTTAAAAA
dot-bracket secondary structure
)..((((..((.(((..((((..(((......((((.((((......)))))))))))..))))..))).))..)))).......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
ATCTTATTCCGAGCATTCCAGTAACTTTTTTGTGTATGTACTTAGCTGTACTATAAGTAGTTGGTTTGTATGAGATGGTTAAAAA
dot-bracket secondary structure
)..((((..((.(((..((((..(((......((((.((((......)))))))))))..))))..))).))..)))).......
SIMILARITIES| miRBase hsa-mir-1244-1: 2.0E-42 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
Identical with: ppy-mir-1244 from miRBase (MNEST031304), ptr-mir-1244-3 from miRBase , hsa-mir-1244-1 from miRBase , hsa-mir-1244-2 from miRBase , hsa-mir-1244-3 from miRBase , ptr-mir-1244-5 from miRBase , ptr-mir-1244-2 from miRBase |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
