ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-1246
source: miRBase, original name: ptr-mir-1246 (MI0008452)
SEQUENCE & STRUCTURE| miRNA AATGGATTTTTGGAGCAGG miRNA* TGACCCAAAGGAAATCAATCCATAGG mismatches: 3 bulges: 7 |
pre-miRNA
TGTATCCTTGAATGGATTTTTGGAGCAGGAGTGGACACCTGACCCAAAGGAAATCAATCCATAGGCTAGCAA
dot-bracket secondary structure
(((..(((...((((((((((((..((((.(....).))))..))))).......))))))))))...))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
TGTATCCTTGAATGGATTTTTGGAGCAGGAGTGGACACCTGACCCAAAGGAAATCAATCCATAGGCTAGCAA
dot-bracket secondary structure
(((..(((...((((((((((((..((((.(....).))))..))))).......))))))))))...))).
SIMILARITIES| miRBase hsa-mir-1246: 2e-35 PMRD no hits microPC no hits | UniProt no hits RFAM U2: 0.0002 |
Identical with: hsa-mir-1246 from miRBase (MNEST029091) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
