ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-1249
source: miRBase, original name: ptr-mir-1249 (MI0008455)
SEQUENCE & STRUCTURE| miRNA ACGCCCTTCCCCCCCTTCTTCA miRNA* GAGGAGGGAGGAGATGGGCCAAGTTC mismatches: 3 bulges: 4 |
pre-miRNA
TGGGAGGAGGGAGGAGATGGGCCAAGTTCCCTCTGGCTGGAACGCCCTTCCCCCCCTTCTTCACCT
dot-bracket secondary structure
).(((((((((.((.((.((((...(((((........))))))))).)).)))))))))))....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
TGGGAGGAGGGAGGAGATGGGCCAAGTTCCCTCTGGCTGGAACGCCCTTCCCCCCCTTCTTCACCT
dot-bracket secondary structure
).(((((((((.((.((.((((...(((((........))))))))).)).)))))))))))....
SIMILARITIES| miRBase hsa-mir-1249: 3.0E-21 PMRD no hits microPC no hits | UniProt no hits RFAM 9mir-1249: 4.0E-15 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
