ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-1272
source: miRBase, original name: ptr-mir-1272 (MI0008473)
SEQUENCE & STRUCTURE| miRNA GATGATGATGGCAGCAAATTCTGAAA miRNA* TTAGAAATGTAGGCTGCAGCTCGTGTG mismatches: 7 bulges: 5 |
pre-miRNA
CCAGATCAGATCTGGGTGCGATGATGATGGCAGCAAATTCTGAAAACGTGCTCAGTGTCTTTATAACAGGAAAGTCGTAAACTTAGAAATGTAGGCTGCA
GCTCGTGTGCTCTGTGGTCTGGGCTGGT
dot-bracket secondary structure
((((..((((((.(((..(.((((.(...(((((.(.((((((..(((.(((.....((((......)))).))))))....)))))).)....))))).
.))))))..)))...))))))..)))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
CCAGATCAGATCTGGGTGCGATGATGATGGCAGCAAATTCTGAAAACGTGCTCAGTGTCTTTATAACAGGAAAGTCGTAAACTTAGAAATGTAGGCTGCA
GCTCGTGTGCTCTGTGGTCTGGGCTGGT
dot-bracket secondary structure
((((..((((((.(((..(.((((.(...(((((.(.((((((..(((.(((.....((((......)))).))))))....)))))).)....))))).
.))))))..)))...))))))..)))).
SIMILARITIES| miRBase hsa-mir-1272: 3e-66 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
