ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-1275
source: miRBase, original name: ptr-mir-1275 (MI0008476)
SEQUENCE & STRUCTURE| miRNA GTGGGGGAGAGGCTGTC miRNA* ATGCCAAACTTATTTTCCCCAAGG mismatches: 4 bulges: 7 |
pre-miRNA
CCTCTGTGAGAAAGGGTGTGGGGGAGAGGCTGTCTTGTGTCTGTAAGTATGCCAAACTTATTTTCCCCAAGGCAGAGGG
dot-bracket secondary structure
(((((((...........((((((((((((...((((......))))...))).......)))))))))..))))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
CCTCTGTGAGAAAGGGTGTGGGGGAGAGGCTGTCTTGTGTCTGTAAGTATGCCAAACTTATTTTCCCCAAGGCAGAGGG
dot-bracket secondary structure
(((((((...........((((((((((((...((((......))))...))).......)))))))))..))))))).
SIMILARITIES| miRBase hsa-mir-1275: 1e-39 PMRD no hits microPC no hits | UniProt no hits RFAM mir-1275: 2e-17 |
Identical with: hsa-mir-1275 from miRBase (MNEST029130) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
