ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-1282
source: miRBase, original name: ptr-mir-1282-1 (MI0008481)
SEQUENCE & STRUCTURE| miRNA TCGTTTGCCTTTTTCTGCTT miRNA* GTACCAGAGGGCAAAAAGGA mismatches: 4 bulges: 0 |
pre-miRNA
CCTTCTTCTCGTTTGCCTTTTTCTGCTTCTGCTGCATGATCTCCGAGTCCCTGGGGGTAGAGATGATGGGGCACTGGGAGGTACCAGAGGGCAAAAAGGA
dot-bracket secondary structure
......(((..((((((((((..((((((((((.(((.(((((....(((....)))..))))).))).)))....)))))))..))))))))))..)))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
CCTTCTTCTCGTTTGCCTTTTTCTGCTTCTGCTGCATGATCTCCGAGTCCCTGGGGGTAGAGATGATGGGGCACTGGGAGGTACCAGAGGGCAAAAAGGA
dot-bracket secondary structure
......(((..((((((((((..((((((((((.(((.(((((....(((....)))..))))).))).)))....)))))))..))))))))))..)))
SIMILARITIES| miRBase eca-mir-1282: 5e-52 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
Identical with: hsa-mir-1282 from miRBase (MNEST029137) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
