ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-1282
source: miRBase, original name: ptr-mir-1282-2 (MI0008483)
SEQUENCE & STRUCTURE| miRNA TCGTTTGCCTTTTTCTGCTT miRNA* GTATCAGAGGGCAAAAAGA mismatches: 3 bulges: 1 |
pre-miRNA
CCTTCTTCTCGTTTGCCTTTTTCTGCTTCTGCTGCATGATCTCCTGAGTCCCTGGGGGTAGAGATGGTAGGGCACTAGGAGGTATCAGAGGGCAAAAAGA
A
dot-bracket secondary structure
......(((..((((((((((..(((((((..(((...((((((((..(((....)))))).)).)))...)))...)))))))..)))))))))).)))
.
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
CCTTCTTCTCGTTTGCCTTTTTCTGCTTCTGCTGCATGATCTCCTGAGTCCCTGGGGGTAGAGATGGTAGGGCACTAGGAGGTATCAGAGGGCAAAAAGA
A
dot-bracket secondary structure
......(((..((((((((((..(((((((..(((...((((((((..(((....)))))).)).)))...)))...)))))))..)))))))))).)))
.
SIMILARITIES| miRBase eca-mir-1282: 5e-37 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
