ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-1288
source: miRBase, original name: ptr-mir-1288 (MI0008488)
SEQUENCE & STRUCTURE| miRNA TGGACTGCCCTGATCTGGAGA miRNA* AGCAGATCAGGACTGCAACTCACC mismatches: 4 bulges: 3 |
pre-miRNA
AGGGTGTTGGTCAGCAGATCAGGACTGCAACTCACCATAGTGGTGGACTGCCCTGATCTGGAGACCACTGCCTT
dot-bracket secondary structure
(((((..(((((..(((((((((...(((..(((((.....)))))..))))))))))))..)))))..)))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
AGGGTGTTGGTCAGCAGATCAGGACTGCAACTCACCATAGTGGTGGACTGCCCTGATCTGGAGACCACTGCCTT
dot-bracket secondary structure
(((((..(((((..(((((((((...(((..(((((.....)))))..))))))))))))..)))))..)))))
SIMILARITIES| miRBase hsa-mir-1288: 7e-32 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
