ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-1294
source: miRBase, original name: ptr-mir-1294 (MI0008497)
SEQUENCE & STRUCTURE| miRNA TGTGAGGTTGGCATTGTTGTCT miRNA* ACAACAGTGCCAACCTCACGGG mismatches: 1 bulges: 0 |
pre-miRNA
ACTTAATGTGTGCCAAGATCTGTTCATTTATGATCTCACCGCGTCCTGTGAGGTTGGCATTGTTGTCTGGCATTGTCTGATATACAACAGTGCCAACCTC
ACGGGACTCAGTGAGGTGAAACTGAGGATTAGGAAGGTGTA
dot-bracket secondary structure
........((..((..(((((..(((.((.(.(((((((.(.((((((((((((((((((((((((.((.((.....)).)).)))))))))))))))))
))))))).).))))))).))).)))))))).....))..))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
ACTTAATGTGTGCCAAGATCTGTTCATTTATGATCTCACCGCGTCCTGTGAGGTTGGCATTGTTGTCTGGCATTGTCTGATATACAACAGTGCCAACCTC
ACGGGACTCAGTGAGGTGAAACTGAGGATTAGGAAGGTGTA
dot-bracket secondary structure
........((..((..(((((..(((.((.(.(((((((.(.((((((((((((((((((((((((.((.((.....)).)).)))))))))))))))))
))))))).).))))))).))).)))))))).....))..))
SIMILARITIES| miRBase hsa-mir-1294: 1e-69 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
