ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-1298
source: miRBase, original name: ptr-mir-1298 (MI0008502)
SEQUENCE & STRUCTURE| miRNA TTCATTCGGCTGTCCAGATGTA miRNA* CATCTGGGCAACTGACTGAACT mismatches: 2 bulges: 0 |
pre-miRNA
GACGAGGAGTTAAGAGTTCATTCGGCTGTCCAGATGTATCCAAGTACCCTGTGTTATTTGGCAATAAATACATCTGGGCAACTGACTGAACTTTTCACTT
TTCATGACTCA
dot-bracket secondary structure
...(((((((.(((((((((.((((.((((((((((((((((((((........)))))))......))))))))))))).)))).))))))))).))))
)))........
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
GACGAGGAGTTAAGAGTTCATTCGGCTGTCCAGATGTATCCAAGTACCCTGTGTTATTTGGCAATAAATACATCTGGGCAACTGACTGAACTTTTCACTT
TTCATGACTCA
dot-bracket secondary structure
...(((((((.(((((((((.((((.((((((((((((((((((((........)))))))......))))))))))))).)))).))))))))).))))
)))........
SIMILARITIES| miRBase hsa-mir-1298: 2e-58 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
Identical with: hsa-mir-1298 from miRBase (MNEST029156) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
