miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST030714
species: Pan troglodytes
miRNA family: miR-1302d
source: miRBase, original name: ptr-mir-1302-1 (MI0008516)







SEQUENCE & STRUCTURE
miRNA
TTGGGACATACTTATGCTAAA

miRNA*
TATGTAAGAATATCCCATAC

mismatches: 5
bulges: 1

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pre-miRNA
CAGAAAGCCCAGTTAAATTTGAATTTCAAGTAAACAATGAATAATTGTGTATGTAAGAATATCCCATACAATATTTGGGACATACTTATGCTAAAAATTA
TTCCTTGCTTATCTGAAATTCAAATGTAACTAGGATTCCTGT


dot-bracket secondary structure
(((....((.(((((.((((((((((((..(((.(((.((((((((...((((((((.((.(((((.........))))).)).)))))).))..)))))
))).))).)))..)))))))))))).))))).))....))).



SIMILARITIES
miRBase hsa-mir-1302-1: 7e-77

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-1302: 0.0000005

Identical with: hsa-mir-1302-1 from miRBase (MNEST029159)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references

[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"




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