miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST030715
species: Pan troglodytes
miRNA family: miR-1302d
source: miRBase, original name: ptr-mir-1302-2 (MI0008517)







SEQUENCE & STRUCTURE
miRNA
TTGGGACATACTTATGCTAAA

miRNA*
TAGCATAAATATGTCCCAAGC

mismatches: 3
bulges: 0

View larger
pre-miRNA
GGATGCCCAGTTAGTTTGAATTCTAGATAAACAACGAATAATTTCGTAGCATAAATATGTCCCAAGCTTAGTTTGGGACATACTTATGCTAAAAAACATT
ATTGGTTGTTTATCTGAGATTCAAAATTAAGCATTTT


dot-bracket secondary structure
((((((....(((((((((((..((((((((((((.((((((....((((((((.((((((((((((...)))))))))))).))))))))......)))
))).))))))))))))..)))).))))))))))))).



SIMILARITIES
miRBase ptr-mir-1302-4: 2e-71

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-1302: 0.0001

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record

references

[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"




Liczniki na strone;