ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: miR-1302d
source: miRBase, original name: ptr-mir-1302-2 (MI0008517)
SEQUENCE & STRUCTURE| miRNA TTGGGACATACTTATGCTAAA miRNA* TAGCATAAATATGTCCCAAGC mismatches: 3 bulges: 0 |
pre-miRNA
GGATGCCCAGTTAGTTTGAATTCTAGATAAACAACGAATAATTTCGTAGCATAAATATGTCCCAAGCTTAGTTTGGGACATACTTATGCTAAAAAACATT
ATTGGTTGTTTATCTGAGATTCAAAATTAAGCATTTT
dot-bracket secondary structure
((((((....(((((((((((..((((((((((((.((((((....((((((((.((((((((((((...)))))))))))).))))))))......)))
))).))))))))))))..)))).))))))))))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
GGATGCCCAGTTAGTTTGAATTCTAGATAAACAACGAATAATTTCGTAGCATAAATATGTCCCAAGCTTAGTTTGGGACATACTTATGCTAAAAAACATT
ATTGGTTGTTTATCTGAGATTCAAAATTAAGCATTTT
dot-bracket secondary structure
((((((....(((((((((((..((((((((((((.((((((....((((((((.((((((((((((...)))))))))))).))))))))......)))
))).))))))))))))..)))).))))))))))))).
SIMILARITIES| miRBase ptr-mir-1302-4: 2e-71 PMRD no hits microPC no hits | UniProt no hits RFAM mir-1302: 0.0001 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
