ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: miR-1302d
source: miRBase, original name: ptr-mir-1302-6 (MI0008521)
SEQUENCE & STRUCTURE| miRNA TTGGGACATACTTATGCTAAA miRNA* TAATATATGTATGGCCCACACAAT mismatches: 5 bulges: 3 |
pre-miRNA
GAACAAATAATTTGGTAATATATGTATGGCCCACACAATATTTAGGACAACAATATTTGGGACATACTTATGCTAAAAAAGTATTTGTTG
dot-bracket secondary structure
)((((((((.(((..((.((((.(((((.((((...((((((.........)))))))))).))))).)))).))..))).)))))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
GAACAAATAATTTGGTAATATATGTATGGCCCACACAATATTTAGGACAACAATATTTGGGACATACTTATGCTAAAAAAGTATTTGTTG
dot-bracket secondary structure
)((((((((.(((..((.((((.(((((.((((...((((((.........)))))))))).))))).)))).))..))).)))))))).
SIMILARITIES| miRBase hsa-mir-1302-6: 2.0E-45 PMRD no hits microPC no hits | UniProt no hits RFAM 2mir-1302: 3.0E-7 |
Identical with: ppy-mir-1302-3 from miRBase (MNEST031358), hsa-mir-1302-6 from miRBase |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
