ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: miR-1302d
source: miRBase, original name: ptr-mir-1302-8 (MI0008523)
SEQUENCE & STRUCTURE| miRNA TTGGGACATACTTATGCTAAA miRNA* AGCATTAGTGTATCACATGC mismatches: 6 bulges: 0 |
pre-miRNA
CCCATTTAAACTTGAATTTCATATAAACACCGTAATTTTCAGCATTAGTGTATCACATGCAGTATTTGGGACATACTTATGCTAAAAAATTAGGTGGTGT
TGATCTGAAATTCCAGTGTAGATGGGC
dot-bracket secondary structure
((((((((.(((.((((((((.((.((((((((((((((.(((((.(((((.((.((.........)).)).))))).)))))..)))))))..))))))
).)).)))))))).))).)))))))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
CCCATTTAAACTTGAATTTCATATAAACACCGTAATTTTCAGCATTAGTGTATCACATGCAGTATTTGGGACATACTTATGCTAAAAAATTAGGTGGTGT
TGATCTGAAATTCCAGTGTAGATGGGC
dot-bracket secondary structure
((((((((.(((.((((((((.((.((((((((((((((.(((((.(((((.((.((.........)).)).))))).)))))..)))))))..))))))
).)).)))))))).))).)))))))).
SIMILARITIES| miRBase hsa-mir-1302-8: 5e-68 PMRD no hits microPC no hits | UniProt no hits RFAM mir-1302: 0.0000001 |
Identical with: hsa-mir-1302-8 from miRBase (MNEST029168) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
