ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-1306
source: miRBase, original name: ptr-mir-1306 (MI0008525)
SEQUENCE & STRUCTURE| miRNA ACGTTGGCTCTGGTGGTG miRNA* CCACCTCCCCTGCAAACGTCC mismatches: 4 bulges: 3 |
pre-miRNA
TGAGCAGTCTCCACCACCTCCCCTGCAAACGTCCAGTGGTGCAGAGGTAATGGACGTTGGCTCTGGTGGTGATGGACAGTCCGA
dot-bracket secondary structure
.(..(.((((.(((((((......((.((((((((....(((....))).)))))))).))...)))))))..)))).)..)..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
TGAGCAGTCTCCACCACCTCCCCTGCAAACGTCCAGTGGTGCAGAGGTAATGGACGTTGGCTCTGGTGGTGATGGACAGTCCGA
dot-bracket secondary structure
.(..(.((((.(((((((......((.((((((((....(((....))).)))))))).))...)))))))..)))).)..)..
SIMILARITIES| miRBase hsa-mir-1306: 2e-42 PMRD no hits microPC no hits | UniProt sp|Q8WYQ5|DGCR8_HUMAN: 0.00000001 RFAM mir-1306: 4e-31 |
Identical with: hsa-mir-1306 from miRBase (MNEST029173) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
