ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-1324
source: miRBase, original name: ptr-mir-1324-2 (MI0008532)
SEQUENCE & STRUCTURE| miRNA CCAGACAGAATTCTATGCACTTTC miRNA* AGGTGCATGAAGCCTGGTCCTGC mismatches: 9 bulges: 1 |
pre-miRNA
CCTGAAGAGGTGCATGAAGCCTGGTCCTGCCCTCACTGGGAACCCCCTTCCCTCTGGGTACCAGACAGAATTCTATGCACTTTCCTGGAGGCTCC
dot-bracket secondary structure
(((..(((((((((((((..(((....(((((.....(((((.....)))))...))))).....)))..))).))))))))..))..)))....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
CCTGAAGAGGTGCATGAAGCCTGGTCCTGCCCTCACTGGGAACCCCCTTCCCTCTGGGTACCAGACAGAATTCTATGCACTTTCCTGGAGGCTCC
dot-bracket secondary structure
(((..(((((((((((((..(((....(((((.....(((((.....)))))...))))).....)))..))).))))))))..))..)))....
SIMILARITIES| miRBase hsa-mir-1324: 5e-49 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
Identical with: ptr-mir-1324-1 from miRBase (MNEST030727) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
