ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: let-7
source: miRBase, original name: ppy-let-7a-1 (MI0014779)
SEQUENCE & STRUCTURE| miRNA TGAGGTAGTAGGTTGTATAGTT miRNA* CTATACAATCTACTGTCTTTCC mismatches: 3 bulges: 0 |
pre-miRNA
TGGGATGAGGTAGTAGGTTGTATAGTTTTAGGGTCACACCCACCACTGGGAGATAACTATACAATCTACTGTCTTTCCTA
dot-bracket secondary structure
(((((.(((..((((((((((((((((...(((.....))).((....))....))))))))))))))))..))))))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
TGGGATGAGGTAGTAGGTTGTATAGTTTTAGGGTCACACCCACCACTGGGAGATAACTATACAATCTACTGTCTTTCCTA
dot-bracket secondary structure
(((((.(((..((((((((((((((((...(((.....))).((....))....))))))))))))))))..))))))))
SIMILARITIES| miRBase mml-let-7a-1: 4e-40 PMRD no hits microPC no hits | UniProt no hits RFAM let-7: 1e-34 |
Identical with: ssc-let-7a-2 from miRBase (MNEST033899) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
