ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: let-7
source: miRBase, original name: ppy-let-7d (MI0014784)
SEQUENCE & STRUCTURE| miRNA AGAGGTAGTAGGTTGCATAGTT miRNA* CTATACGACCTGCTGCCTTTCT mismatches: 2 bulges: 0 |
pre-miRNA
CCTAGGAAGAGGTAGTAGGTTGCATAGTTTTAGGGCAGGGATTTTGCCCACAAGGAGGTAACTATACGACCTGCTGCCTTTCTTAGG
dot-bracket secondary structure
(((((((.((((((((((((((.((((((...((((((.....)))))).(.....)..)))))).)))))))))))))))))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
CCTAGGAAGAGGTAGTAGGTTGCATAGTTTTAGGGCAGGGATTTTGCCCACAAGGAGGTAACTATACGACCTGCTGCCTTTCTTAGG
dot-bracket secondary structure
(((((((.((((((((((((((.((((((...((((((.....)))))).(.....)..)))))).)))))))))))))))))))))
SIMILARITIES| miRBase mml-let-7d: 3e-44 PMRD no hits microPC no hits | UniProt no hits RFAM let-7: 1e-34 |
Identical with: ptr-let-7d from miRBase (MNEST030131) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
