ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: let-7
source: miRBase, original name: ppy-let-7f-2 (MI0014787)
SEQUENCE & STRUCTURE| miRNA TGAGGTAGTAGATTGTATAGTT miRNA* CTATACAGTCTACTGTCTTTCC mismatches: 3 bulges: 0 |
pre-miRNA
TGTGGGATGAGGTAGTAGATTGTATAGTTTTAGGGTCATACCCCATCTTGGAGATAACTATACAGTCTACTGTCTTTCCCACG
dot-bracket secondary structure
.((((((.(((..((((((((((((((((...(((.....))).(((.....)))))))))))))))))))..))))))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
TGTGGGATGAGGTAGTAGATTGTATAGTTTTAGGGTCATACCCCATCTTGGAGATAACTATACAGTCTACTGTCTTTCCCACG
dot-bracket secondary structure
.((((((.(((..((((((((((((((((...(((.....))).(((.....)))))))))))))))))))..))))))))).
SIMILARITIES| miRBase mml-let-7f-2: 6e-42 PMRD no hits microPC no hits | UniProt no hits RFAM let-7: 3e-35 |
Identical with: mmu-let-7f-2 from miRBase (MNEST031760) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
