ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-1
source: miRBase, original name: ppy-mir-1-1 (MI0014778)
SEQUENCE & STRUCTURE| miRNA TGGAATGTAAAGAAGTATGTAT miRNA* ACATACTTCTTTATATGCCCATA mismatches: 2 bulges: 1 |
pre-miRNA
TGGGAAACATACTTCTTTATATGCCCATATGGACCTGCTAAGCTATGGAATGTAAAGAAGTATGTATCTCA
dot-bracket secondary structure
.((((.((((((((((((((((..((((((((.....)))...))))).)))))))))))))))).)))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
TGGGAAACATACTTCTTTATATGCCCATATGGACCTGCTAAGCTATGGAATGTAAAGAAGTATGTATCTCA
dot-bracket secondary structure
.((((.((((((((((((((((..((((((((.....)))...))))).)))))))))))))))).)))).
SIMILARITIES| miRBase mml-mir-1-1: 7e-35 PMRD no hits microPC no hits | UniProt no hits RFAM mir-1: 2e-26 |
Identical with: ptr-mir-1-1 from miRBase (MNEST030137) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
