ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-27
source: miRBase, original name: ppy-mir-27b (MI0014800)
SEQUENCE & STRUCTURE| miRNA TTCACAGTGGCTAAGTTCTGC miRNA* AGAGCTTAGCTGATTGGTGAACA mismatches: 2 bulges: 2 |
pre-miRNA
ACCTCTCTAACAAGGTGCAGAGCTTAGCTGATTGGTGAACAGTGATTGGTTTCCGCTTTGTTCACAGTGGCTAAGTTCTGCACCTGAAGAGAAGGTG
dot-bracket secondary structure
((((((((....((((((((((((((((((....((((((((....(((...)))..))))))))..))))))))))))))))))..)))).)))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
ACCTCTCTAACAAGGTGCAGAGCTTAGCTGATTGGTGAACAGTGATTGGTTTCCGCTTTGTTCACAGTGGCTAAGTTCTGCACCTGAAGAGAAGGTG
dot-bracket secondary structure
((((((((....((((((((((((((((((....((((((((....(((...)))..))))))))..))))))))))))))))))..)))).)))).
SIMILARITIES| miRBase mml-mir-27b: 3e-50 PMRD no hits microPC no hits | UniProt no hits RFAM mir-27: 4e-28 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
