ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-29
source: miRBase, original name: ppy-mir-29c (MI0014801)
SEQUENCE & STRUCTURE| miRNA TAGCACCATTTGAAATCGGTTA miRNA* ACCGATTTCTCCTGGTGTTCAG mismatches: 4 bulges: 0 |
pre-miRNA
ATCTCTTACACAGGCTGACCGATTTCTCCTGGTGTTCAGAGTCTGTTTTTGTCTAGCACCATTTGAAATCGGTTATGATGTAGGGGGA
dot-bracket secondary structure
.(((((((((((...(((((((((((...((((((((((((.....)))))...)))))))...))))))))))))).))))))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
ATCTCTTACACAGGCTGACCGATTTCTCCTGGTGTTCAGAGTCTGTTTTTGTCTAGCACCATTTGAAATCGGTTATGATGTAGGGGGA
dot-bracket secondary structure
.(((((((((((...(((((((((((...((((((((((((.....)))))...)))))))...))))))))))))).))))))))).
SIMILARITIES| miRBase eca-mir-29c: 7e-45 PMRD no hits microPC no hits | UniProt no hits RFAM mir-29: 5e-18 |
Identical with: eca-mir-29c from miRBase (MNEST026973) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
