ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-30
source: miRBase, original name: ppy-mir-30a (MI0002669)
SEQUENCE & STRUCTURE| miRNA CTTTCAGTCGGATGTTTGCAGC miRNA* TGTAAACATCCTCGACTGGAAGCT mismatches: 1 bulges: 2 |
pre-miRNA
GCGACTGTAAACATCCTCGACTGGAAGCTGTGAAGCCACAGATGGGCTTTCAGTCGGATGTTTGCAGCTGC
dot-bracket secondary structure
(((.((((((((((((..((((((((((((((....))).....))))))))))))))))))))))).)))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
GCGACTGTAAACATCCTCGACTGGAAGCTGTGAAGCCACAGATGGGCTTTCAGTCGGATGTTTGCAGCTGC
dot-bracket secondary structure
(((.((((((((((((..((((((((((((((....))).....))))))))))))))))))))))).)))
SIMILARITIES| miRBase ggo-mir-30a: 7e-35 PMRD no hits microPC no hits | UniProt no hits RFAM mir-30: 1e-27 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
