ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-30
source: miRBase, original name: ppy-mir-30d (MI0014804)
SEQUENCE & STRUCTURE| miRNA TGTAAACATCCCCGACTGGAAG miRNA* TTCAGTCAGATGTTTGCTGC mismatches: 2 bulges: 2 |
pre-miRNA
GTTGTTGTAAACATCCCCGACTGGAAGCTGTAAGACACAGCTAAGCTTTCAGTCAGATGTTTGCTGCTAC
dot-bracket secondary structure
...((.(((((((((...(((((((((((...((......)).))))))))))).))))))))).))...
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
GTTGTTGTAAACATCCCCGACTGGAAGCTGTAAGACACAGCTAAGCTTTCAGTCAGATGTTTGCTGCTAC
dot-bracket secondary structure
...((.(((((((((...(((((((((((...((......)).))))))))))).))))))))).))...
SIMILARITIES| miRBase mne-mir-30d: 3e-34 PMRD no hits microPC no hits | UniProt no hits RFAM mir-30: 7e-20 |
Identical with: ggo-mir-30d from miRBase (MNEST028281) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
