ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-32
source: miRBase, original name: ppy-mir-32 (MI0002680)
SEQUENCE & STRUCTURE| miRNA TATTGCACATTACTAAGTTGC miRNA* AATTTAGTGTGTGTGATATT mismatches: 2 bulges: 1 |
pre-miRNA
GGAGATATTGCACATTACTAAGTTGCATGTTGTCACGGCCTCAATGCAATTTAGTGTGTGTGATATTTTC
dot-bracket secondary structure
((((((((..(((((.(((((((((((((..((....))..).)))))))))))))))))..))))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
GGAGATATTGCACATTACTAAGTTGCATGTTGTCACGGCCTCAATGCAATTTAGTGTGTGTGATATTTTC
dot-bracket secondary structure
((((((((..(((((.(((((((((((((..((....))..).)))))))))))))))))..))))))))
SIMILARITIES| miRBase sla-mir-32: 3e-34 PMRD no hits microPC no hits | UniProt no hits RFAM mir-32: 7e-26 |
Identical with: ppa-mir-32 from miRBase (MNEST030070) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
