ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-33
source: miRBase, original name: ppy-mir-33 (MI0002687)
SEQUENCE & STRUCTURE| miRNA GTGCATTGTAGTTGCATTG miRNA* ATGTTTCCACAGTGCATCA mismatches: 3 bulges: 0 |
pre-miRNA
CTGCGGTGCATTGTAGTTGCATTGCATGTTCTGGTGGTACCCATGCAATGTTTCCACAGTGCATCACAG
dot-bracket secondary structure
(((.((((((((((.(..((((((((((....((.....))))))))))))..).)))))))))).)))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
CTGCGGTGCATTGTAGTTGCATTGCATGTTCTGGTGGTACCCATGCAATGTTTCCACAGTGCATCACAG
dot-bracket secondary structure
(((.((((((((((.(..((((((((((....((.....))))))))))))..).)))))))))).)))
SIMILARITIES| miRBase mml-mir-33a: 3e-31 PMRD no hits microPC no hits | UniProt no hits RFAM mir-33: 7e-23 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
