ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-33
source: miRBase, original name: ppy-mir-33b (MI0014806)
SEQUENCE & STRUCTURE| miRNA GTGCATGCTGTTGCATGCAC miRNA* GCATGCTGTTGCATGCACGT mismatches: 4 bulges: 0 |
pre-miRNA
GCGAGGCGGCGCCCGCGTGCATGCTGTTGCATGCACGTGTTGAGCGGTGCAGTGCCTCGGCAGTGCAGCCCGGAGCCGGCCCCTGGCACC
dot-bracket secondary structure
((.(((((((.(((((((((((((....)))))))))))......((((((.(((....))).)))).)).)).))))...))).))...
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
GCGAGGCGGCGCCCGCGTGCATGCTGTTGCATGCACGTGTTGAGCGGTGCAGTGCCTCGGCAGTGCAGCCCGGAGCCGGCCCCTGGCACC
dot-bracket secondary structure
((.(((((((.(((((((((((((....)))))))))))......((((((.(((....))).)))).)).)).))))...))).))...
SIMILARITIES| miRBase cfa-mir-33b: 3e-19 PMRD no hits microPC no hits | UniProt no hits RFAM mir-33: 0.00000008 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
