ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-34
source: miRBase, original name: ppy-mir-34b (MI0014807)
SEQUENCE & STRUCTURE| miRNA CAATCACTAACTCCACTGCCAT miRNA* GGCAGTGTCATTAGCTGATTGTA mismatches: 5 bulges: 1 |
pre-miRNA
GTGCTCGGTTTGTAGGCAGTGTCATTAGCTGATTGTACTGTGATGGTTACAATCACTAACTCCACTGCCATCAAAACAAGGCAC
dot-bracket secondary structure
(((((..((((...(((((((...((((.((((((((((.....)).))))))))))))...)))))))....))))..)))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
GTGCTCGGTTTGTAGGCAGTGTCATTAGCTGATTGTACTGTGATGGTTACAATCACTAACTCCACTGCCATCAAAACAAGGCAC
dot-bracket secondary structure
(((((..((((...(((((((...((((.((((((((((.....)).))))))))))))...)))))))....))))..)))))
SIMILARITIES| miRBase mml-mir-34b: 4e-40 PMRD no hits microPC no hits | UniProt no hits RFAM mir-34: 2e-29 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
