ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-99
source: miRBase, original name: ppy-mir-99a (MI0002705)
SEQUENCE & STRUCTURE| miRNA AACCCGTAGATCCGATCTTGTG miRNA* CACAAGCTCGCTTCTATGGGTCTG mismatches: 4 bulges: 2 |
pre-miRNA
CCCATTGGCATAAACCCGTAGATCCGATCTTGTGGTAAAGTGGACCGCACAAGCTCGCTTCTATGGGTCTGTGTCAGTGTG
dot-bracket secondary structure
..((((((((((.(((((((((..(((.((((((((.......))))))..)).)))..))))))))).))))))))))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
CCCATTGGCATAAACCCGTAGATCCGATCTTGTGGTAAAGTGGACCGCACAAGCTCGCTTCTATGGGTCTGTGTCAGTGTG
dot-bracket secondary structure
..((((((((((.(((((((((..(((.((((((((.......))))))..)).)))..))))))))).))))))))))..
SIMILARITIES| miRBase lla-mir-99a: 2e-38 PMRD no hits microPC no hits | UniProt no hits RFAM mir-10: 8e-23 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
