ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-101
source: miRBase, original name: ppy-mir-101 (MI0002721)
SEQUENCE & STRUCTURE| miRNA TACAGTACTGTGATAACTGAA miRNA* CAGTTATCACAGTGCTGATGCT mismatches: 1 bulges: 1 |
pre-miRNA
TGCCCTGGCTCAGTTATCACAGTGCTGATGCTGTCTATTCTAAAGGTACAGTACTGTGATAACTGAAGGATGGCA
dot-bracket secondary structure
.(((.....((((((((((((((((((.((((............)))))))))))))))))))))).....))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
TGCCCTGGCTCAGTTATCACAGTGCTGATGCTGTCTATTCTAAAGGTACAGTACTGTGATAACTGAAGGATGGCA
dot-bracket secondary structure
.(((.....((((((((((((((((((.((((............)))))))))))))))))))))).....))).
SIMILARITIES| miRBase age-mir-101: 3e-37 PMRD no hits microPC no hits | UniProt no hits RFAM mir-101: 3e-31 |
Identical with: age-mir-101 from miRBase (MNEST027502) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
