ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-105
source: miRBase, original name: ppy-mir-105-2 (MI0014814)
SEQUENCE & STRUCTURE| miRNA TCAAATGCTCAGACTCCTGTGGT miRNA* CACGGATGTTTGAGCATGTGCTA mismatches: 4 bulges: 0 |
pre-miRNA
TGTGCATCGTGGTCAAATGCTCAGACTCCTGTGGTGGCTGCTTATGCACCACGGATGTTTGAGCATGTGCTATGGTGTCTA
dot-bracket secondary structure
...(((((((((.((.((((((((((..((((((((.(.......)))))))))..)))))))))).)))))))))))...
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
TGTGCATCGTGGTCAAATGCTCAGACTCCTGTGGTGGCTGCTTATGCACCACGGATGTTTGAGCATGTGCTATGGTGTCTA
dot-bracket secondary structure
...(((((((((.((.((((((((((..((((((((.(.......)))))))))..)))))))))).)))))))))))...
SIMILARITIES| miRBase mml-mir-105-2: 9e-41 PMRD no hits microPC no hits | UniProt no hits RFAM mir-105: 2e-32 |
Identical with: ptr-mir-105 from miRBase (MNEST030203) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
