ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-129
source: miRBase, original name: ppy-mir-129-1 (MI0014820)
SEQUENCE & STRUCTURE| miRNA CTTTTTGCGGTCTGGGCTTGC miRNA* AAGCCCTTACCCCAAAAAGTA mismatches: 4 bulges: 0 |
pre-miRNA
GGATCTTTTTGCGGTCTGGGCTTGCTGTTCCTCTCAACAGTAGTCAGGAAGCCCTTACCCCAAAAAGTATCT
dot-bracket secondary structure
(((((((((((.(((..((((((.(((..(..((....))..).))).))))))..))).))))))).))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
GGATCTTTTTGCGGTCTGGGCTTGCTGTTCCTCTCAACAGTAGTCAGGAAGCCCTTACCCCAAAAAGTATCT
dot-bracket secondary structure
(((((((((((.(((..((((((.(((..(..((....))..).))).))))))..))).))))))).))))
SIMILARITIES| miRBase eca-mir-129a: 2e-35 PMRD no hits microPC no hits | UniProt no hits RFAM mir-129: 3e-34 |
Identical with: cfa-mir-129-1 from miRBase (MNEST026696) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
