ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-129
source: miRBase, original name: ppy-mir-129-2 (MI0014821)
SEQUENCE & STRUCTURE| miRNA CTTTTTGCGGTCTGGGCTTGC miRNA* CGGAAGCCCTTACCCCAAAAAGCA mismatches: 3 bulges: 3 |
pre-miRNA
TGCCCTTCGCGAATCTTTTTGCGGTCTGGGCTTGCTGTACATAACTCAATAGCCGGAAGCCCTTACCCCAAAAAGCATTTGCGGAGGGCG
dot-bracket secondary structure
.((((((((((((((((((((.(((..(((((((((((..........)))))...))))))..))).))))))).))))))))))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
TGCCCTTCGCGAATCTTTTTGCGGTCTGGGCTTGCTGTACATAACTCAATAGCCGGAAGCCCTTACCCCAAAAAGCATTTGCGGAGGGCG
dot-bracket secondary structure
.((((((((((((((((((((.(((..(((((((((((..........)))))...))))))..))).))))))).))))))))))))).
SIMILARITIES| miRBase hsa-mir-129-2: 4e-46 PMRD no hits microPC no hits | UniProt no hits RFAM mir-129: 6e-27 |
Identical with: hsa-mir-129-2 from miRBase (MNEST028441) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
