ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-142
source: miRBase, original name: ppy-mir-142 (MI0014833)
SEQUENCE & STRUCTURE| miRNA CATAAAGTAGAAAGCACTACT miRNA* TAGTGTTTCCTACTTTATGGA mismatches: 2 bulges: 0 |
pre-miRNA
GACAGTGCAGTCACCCATAAAGTAGAAAGCACTACTAACAGCACTGGAGGGTGTAGTGTTTCCTACTTTATGGATGAGTGTACTGTG
dot-bracket secondary structure
.((((((((.(((.(((((((((((.(((((((((...(..(....)..)..))))))))).))))))))))).))).)))))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
GACAGTGCAGTCACCCATAAAGTAGAAAGCACTACTAACAGCACTGGAGGGTGTAGTGTTTCCTACTTTATGGATGAGTGTACTGTG
dot-bracket secondary structure
.((((((((.(((.(((((((((((.(((((((((...(..(....)..)..))))))))).))))))))))).))).)))))))).
SIMILARITIES| miRBase mml-mir-142: 3e-44 PMRD no hits microPC no hits | UniProt no hits RFAM mir-142: 2e-42 |
Identical with: rno-mir-142 from miRBase (MNEST032747) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
