ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-147
source: miRBase, original name: ppy-mir-147b (MI0014836)
SEQUENCE & STRUCTURE| miRNA GTGTGCGGAAATGCTTCTGCTA miRNA* GTGGAAACATTTCTGCACAAACTAGATTCTG mismatches: 3 bulges: 9 |
pre-miRNA
TATAAATCTAGTGGAAACATTTCTGCACAAACTAGATTCTGGACACCAGTGTGCGGAAATGCTTCTGCTACATTTTTAGG
dot-bracket secondary structure
((.((((.(((..(((.((((((((((((.........((((...)))))))))))))))).)))..))).)))).))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
TATAAATCTAGTGGAAACATTTCTGCACAAACTAGATTCTGGACACCAGTGTGCGGAAATGCTTCTGCTACATTTTTAGG
dot-bracket secondary structure
((.((((.(((..(((.((((((((((((.........((((...)))))))))))))))).)))..))).)))).))..
SIMILARITIES| miRBase hsa-mir-147b: 4e-40 PMRD no hits microPC no hits | UniProt no hits RFAM mir-147: 1e-18 |
Identical with: hsa-mir-147b from miRBase (MNEST028470) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
