ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-148
source: miRBase, original name: ppy-mir-148a (MI0014837)
SEQUENCE & STRUCTURE| miRNA TCAGTGCACTACAGAACTTTGT miRNA* AAAGTTCTGAGACACTCCGACT mismatches: 1 bulges: 4 |
pre-miRNA
GAGGCAAAGTTCTGAGACACTCCGACTCTGAGTATGATAGAAGTCAGTGCACTACAGAACTTTGTCTC
dot-bracket secondary structure
((((((((((((((((.((((..(((((((.......))).))))))))..)).))))))))))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
GAGGCAAAGTTCTGAGACACTCCGACTCTGAGTATGATAGAAGTCAGTGCACTACAGAACTTTGTCTC
dot-bracket secondary structure
((((((((((((((((.((((..(((((((.......))).))))))))..)).))))))))))))))
SIMILARITIES| miRBase mml-mir-148a: 4e-33 PMRD no hits microPC no hits | UniProt no hits RFAM mir-148: 7e-32 |
Identical with: mml-mir-148a from miRBase (MNEST027756) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
