ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-28
source: miRBase, original name: ppy-mir-151 (MI0014841)
SEQUENCE & STRUCTURE| miRNA CTAGACTGAAGCTCCTTGAGG miRNA* TCGAGGAGCTCACAGTCTAGTA mismatches: 1 bulges: 1 |
pre-miRNA
TTTCCTGCCCTCGAGGAGCTCACAGTCTAGTATGTCTCATCCCCTACTAGACTGAAGCTCCTTGAGGACAGGGATGGTCATACTCACCT
dot-bracket secondary structure
.((((((.((((((((((((..((((((((((.(........).)))))))))).)))))))))))).)))))).(((.......))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
TTTCCTGCCCTCGAGGAGCTCACAGTCTAGTATGTCTCATCCCCTACTAGACTGAAGCTCCTTGAGGACAGGGATGGTCATACTCACCT
dot-bracket secondary structure
.((((((.((((((((((((..((((((((((.(........).)))))))))).)))))))))))).)))))).(((.......))).
SIMILARITIES| miRBase mml-mir-151: 2e-45 PMRD no hits microPC no hits | UniProt no hits RFAM mir-28: 3e-35 |
Identical with: mml-mir-151 from miRBase (MNEST027761) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
