ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-153
source: miRBase, original name: ppy-mir-153-2 (MI0014842)
SEQUENCE & STRUCTURE| miRNA TTGCATAGTCACAAAAGTGATC miRNA* CATTTTTGTGATGTTGCAGCT mismatches: 3 bulges: 0 |
pre-miRNA
AGCGGTGGCCAGTGTCATTTTTGTGATGTTGCAGCTAGTAATATGAGCCCAGTTGCATAGTCACAAAAGTGATCATTGGAAACTGTG
dot-bracket secondary structure
.(((((..(((((((((((((((((((..(((((((.((.......))..)))))))..))))))))))))).))))))..))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
AGCGGTGGCCAGTGTCATTTTTGTGATGTTGCAGCTAGTAATATGAGCCCAGTTGCATAGTCACAAAAGTGATCATTGGAAACTGTG
dot-bracket secondary structure
.(((((..(((((((((((((((((((..(((((((.((.......))..)))))))..))))))))))))).))))))..))))).
SIMILARITIES| miRBase mml-mir-153-2: 3e-44 PMRD no hits microPC no hits | UniProt no hits RFAM mir-153: 1e-37 |
Identical with: mml-mir-153-2 from miRBase (MNEST027764) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
