ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-181
source: miRBase, original name: ppy-mir-181a-2 (MI0014844)
SEQUENCE & STRUCTURE| miRNA AACATTCAACGCTGTCGGTGAGT miRNA* CACTGACCGTTGACTGTACC mismatches: 2 bulges: 3 |
pre-miRNA
AGAAGGGCTATCAGGCCAGCCTTCAGAGGACTCCAAGGAACATTCAACGCTGTCGGTGAGTTTGGGATTTGAAAAAACCACTGACCGTTGACTGTACCTT
GGGGTCCTTA
dot-bracket secondary structure
.((((((((....)))...))))).(((((((((((((.(((.((((((..(((((((.((((...........))))))))))))))))).))).))))
))))))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
AGAAGGGCTATCAGGCCAGCCTTCAGAGGACTCCAAGGAACATTCAACGCTGTCGGTGAGTTTGGGATTTGAAAAAACCACTGACCGTTGACTGTACCTT
GGGGTCCTTA
dot-bracket secondary structure
.((((((((....)))...))))).(((((((((((((.(((.((((((..(((((((.((((...........))))))))))))))))).))).))))
))))))))).
SIMILARITIES| miRBase hsa-mir-181a-2: 6e-58 PMRD no hits microPC no hits | UniProt no hits RFAM mir-181: 3e-29 |
Identical with: ptr-mir-181a-2 from miRBase (MNEST030252) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
