ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-181
source: miRBase, original name: ppy-mir-181b (MI0002936)
SEQUENCE & STRUCTURE| miRNA AACATTCATTGCTGTCGGTGGGT miRNA* TCACTGAACAATGAATGCAAC mismatches: 3 bulges: 2 |
pre-miRNA
CCTGTGCAGAGATTATTGTTTAAAAGGTCACAATCAACATTCATTGCTGTCGGTGGGTTGAACTGTGTGGACAAGCTCACTGAACAATGAATGCAACTGT
GGCCCCGCTT
dot-bracket secondary structure
.....((..((((....))))....(((((((.....(((((((((...((((((((((...((....))...)))))))))).)))))))))....)))
))))..))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
CCTGTGCAGAGATTATTGTTTAAAAGGTCACAATCAACATTCATTGCTGTCGGTGGGTTGAACTGTGTGGACAAGCTCACTGAACAATGAATGCAACTGT
GGCCCCGCTT
dot-bracket secondary structure
.....((..((((....))))....(((((((.....(((((((((...((((((((((...((....))...)))))))))).)))))))))....)))
))))..))..
SIMILARITIES| miRBase lla-mir-181b: 2e-55 PMRD no hits microPC no hits | UniProt no hits RFAM mir-181: 0.0000000001 |
Identical with: cfa-mir-181b-1 from miRBase (MNEST026733) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
