ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-181
source: miRBase, original name: ppy-mir-181d (MI0014847)
SEQUENCE & STRUCTURE| miRNA AACATTCATTGTTGTCGGTGGGT miRNA* CCACCGGGGGATGAATGTCAC mismatches: 2 bulges: 2 |
pre-miRNA
TCCCCTCCCCTAGGCCACAGCCAAGGTCACAATCAACATTCATTGTTGTCGGTGGGTTGTGAGGACCGAGGCCAGACCCACCGGGGGATGAATGTCACTG
TGGCTGGGCCAGACACGGCTTAAGGGGAATGGGGAC
dot-bracket secondary structure
((((((((((((((((...(((..(((((((....(((((((((.(..((((((((((....((.(....))).))))))))))).)))))))))...))
))))).))).......))))).))))))..))))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
TCCCCTCCCCTAGGCCACAGCCAAGGTCACAATCAACATTCATTGTTGTCGGTGGGTTGTGAGGACCGAGGCCAGACCCACCGGGGGATGAATGTCACTG
TGGCTGGGCCAGACACGGCTTAAGGGGAATGGGGAC
dot-bracket secondary structure
((((((((((((((((...(((..(((((((....(((((((((.(..((((((((((....((.(....))).))))))))))).)))))))))...))
))))).))).......))))).))))))..))))).
SIMILARITIES| miRBase mml-mir-181d: 2e-73 PMRD no hits microPC no hits | UniProt no hits RFAM mir-181: 0.0000000000005 |
Identical with: mml-mir-181d from miRBase (MNEST027772) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
