ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-182
source: miRBase, original name: ppy-mir-182 (MI0002816)
SEQUENCE & STRUCTURE| miRNA TTTGGCAATGGTAGAACTCACA miRNA* GTTCTAGACTTGCCAACTA mismatches: 2 bulges: 5 |
pre-miRNA
CACAGCTGCTTGCCTTCCCCCGTTTTTGGCAATGGTAGAACTCACACTGGTGAGGTAACAGGATCCGGTGGTTCTAGACTTGCCAACTATGGGGCGAGGA
CTCAGCCGGCAC
dot-bracket secondary structure
....((((((..((((.((((((..(((((((.(.((((((...((((((..............))))))))))))..))))))))..)))))).)))).
...)).))))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
CACAGCTGCTTGCCTTCCCCCGTTTTTGGCAATGGTAGAACTCACACTGGTGAGGTAACAGGATCCGGTGGTTCTAGACTTGCCAACTATGGGGCGAGGA
CTCAGCCGGCAC
dot-bracket secondary structure
....((((((..((((.((((((..(((((((.(.((((((...((((((..............))))))))))))..))))))))..)))))).)))).
...)).))))..
SIMILARITIES| miRBase hsa-mir-182: 6e-55 PMRD no hits microPC no hits | UniProt no hits RFAM mir-182: 1e-41 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
