ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-184
source: miRBase, original name: ppy-mir-184 (MI0002603)
SEQUENCE & STRUCTURE| miRNA TGGACGGAGAACTGATAAGGGT miRNA* CCTTATCACTTTTCCAGCCCAGC mismatches: 3 bulges: 1 |
pre-miRNA
CCAGTCACGTCCCCTTATCACTTTTCCAGCCCAGCTTTGTGACTGTAAGTGTTGGACGGAGAACTGATAAGGGTAGGTGATTGA
dot-bracket secondary structure
.(((((((.(.(((((((((.((((((.(.(((((((((......)))).))))).))))))).))))))))).).))))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
CCAGTCACGTCCCCTTATCACTTTTCCAGCCCAGCTTTGTGACTGTAAGTGTTGGACGGAGAACTGATAAGGGTAGGTGATTGA
dot-bracket secondary structure
.(((((((.(.(((((((((.((((((.(.(((((((((......)))).))))).))))))).))))))))).).))))))).
SIMILARITIES| miRBase hsa-mir-184: 2e-42 PMRD no hits microPC no hits | UniProt no hits RFAM mir-184: 6e-27 |
Identical with: ptr-mir-184 from miRBase (MNEST030259) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
