ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-187
source: miRBase, original name: ppy-mir-187 (MI0002818)
SEQUENCE & STRUCTURE| miRNA TCGTGTCTTGTGTTGCAGCCG miRNA* GCTACAACATAGGACCCGGGC mismatches: 4 bulges: 0 |
pre-miRNA
GGTTGGGCTCACCATGACACAGTGTGAGACCTCGGGCTACAACATAGGACCCGGGCGCTGCTCTGACCCCTCGTGTCTTGTGTTGCAGCCGGAGGGACGC
AGGTCCGCA
dot-bracket secondary structure
...(((.....))).(((...((((....((((.((((.(((((((((((.((((.((......).).)).)).))))))))))).)))).)))).))))
..)))....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
GGTTGGGCTCACCATGACACAGTGTGAGACCTCGGGCTACAACATAGGACCCGGGCGCTGCTCTGACCCCTCGTGTCTTGTGTTGCAGCCGGAGGGACGC
AGGTCCGCA
dot-bracket secondary structure
...(((.....))).(((...((((....((((.((((.(((((((((((.((((.((......).).)).)).))))))))))).)))).)))).))))
..)))....
SIMILARITIES| miRBase ggo-mir-187: 1e-52 PMRD no hits microPC no hits | UniProt no hits RFAM mir-187: 9e-39 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
