ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-190
source: miRBase, original name: ppy-mir-190 (MI0014851)
SEQUENCE & STRUCTURE| miRNA TGATATGTTTGATATATTAGGT miRNA* TATATATCAAACATATTCCT mismatches: 2 bulges: 2 |
pre-miRNA
TGCAGGCCTCTGTGTGATATGTTTGATATATTAGGTTGTTATTTAATCCAACTATATATCAAACATATTCCTACAGTGTCTTGCC
dot-bracket secondary structure
.(((((.(.(((((..(((((((((((((((..(((((..........))))))))))))))))))))..).)))).).))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
TGCAGGCCTCTGTGTGATATGTTTGATATATTAGGTTGTTATTTAATCCAACTATATATCAAACATATTCCTACAGTGTCTTGCC
dot-bracket secondary structure
.(((((.(.(((((..(((((((((((((((..(((((..........))))))))))))))))))))..).)))).).))))).
SIMILARITIES| miRBase cfa-mir-190a: 4e-43 PMRD no hits microPC no hits | UniProt no hits RFAM mir-190: 2e-39 |
Identical with: oan-mir-190a from miRBase (MNEST031518) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
