ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-190
source: miRBase, original name: ppy-mir-190b (MI0014852)
SEQUENCE & STRUCTURE| miRNA TGATATGTTTGATATTGGGTT miRNA* CTAAATGTCAAACATATTCTT mismatches: 2 bulges: 0 |
pre-miRNA
TGCTTCTGTGTGATATGTTTGATATTGGGTTGTTTAATTAGGAACCAACTAAATGTCAAACATATTCTTACAGCAGCAG
dot-bracket secondary structure
((((.(((((.(((((((((((((((.((((((((......))).))))).)))))))))))))))..))))).)))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
TGCTTCTGTGTGATATGTTTGATATTGGGTTGTTTAATTAGGAACCAACTAAATGTCAAACATATTCTTACAGCAGCAG
dot-bracket secondary structure
((((.(((((.(((((((((((((((.((((((((......))).))))).)))))))))))))))..))))).)))).
SIMILARITIES| miRBase hsa-mir-190b: 1e-39 PMRD no hits microPC no hits | UniProt no hits RFAM mir-190: 1e-33 |
Identical with: ptr-mir-190b from miRBase (MNEST030264) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
