miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST030881
species: Pongo pygmaeus
miRNA family: mir-192
source: miRBase, original name: ppy-mir-192 (MI0014854)







SEQUENCE & STRUCTURE
miRNA
CTGACCTATGAATTGACAGCC

miRNA*
CTGCCAATTCCATAGGTCACAG

mismatches: 2
bulges: 1

View larger
pre-miRNA
GCCGAGACCGAGTGCACAGGGCTCTGACCTATGAATTGACAGCCAGTGCTCTCGTCTCCCCTCTGGCTGCCAATTCCATAGGTCACAGGTATGTTCGCCT
CAATGCCAGC


dot-bracket secondary structure
.........(((.(((((.(.((.((((((((((((((.(((((((................))))))).))))).))))))))).)).).)))..))))
).........



SIMILARITIES
miRBase hsa-mir-192: 6e-58

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-192: 7e-49

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references

[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"




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